Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
| 2VED Chain:A ((16-41)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKRIKDEEDVEKELGLPVLGSIQKFN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 256 for 99 contacts (2.6/contact) +
2D Compatibility (PS) -2711 + (NN) -195 + (LL) 16584
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: 9434.0 ( 95.29 by residue)
QMean score : 0.765
|
|
|