Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE |
4K02 Chain:A ((38-80)) | -------------------------------------------------------------------------------------------------------PVSPVCCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGIQ----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21974 for 184 contacts (-119.4/contact) +
2D Compatibility (PS) -4066 + (NN) 1327 + (LL) 18676
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -8687.0 ( -47.21 by residue)
QMean score : 0.022
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