Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSTTLKVRLISNFLQLIITTAFIPFIALYLTDMLSQSIVGIYLVGLVVLKFPLSIISGYLIEIFPKKLLVLIYQATMVIMLVFMGVFGSHQLWQIIGFCVAYAIFTIVWGLQFPVMDTLIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGYSMLLLFLIAACIFLIVLFILYIWLPQDRNQVKQSDDKRHASRYQKLQIMNIFRSYKLVLKDRNYMLLISGFSIIMMGEFSISSYIAIRLKDQFETISIGSYDITGAKMLAILLMINTVVVILLTYSISKVVLKIDFKKALITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGEIIYSPIVSEQRFKIIPKAKRGTYSAVNALGIHFSETLARLGIVLGVFLTSLQMGLYMF--IVLTIGASMLVAGVFGGQKQVNTN |
| 1VB5 Chain:A ((103-189)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVI-----LTESSPDYEGLHLARELEFSGIEFEV-ITDAQMGLFCREASIAIVGADMIT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98243 for 577 contacts (-170.3/contact) +
2D Compatibility (PS) -8812 + (NN) 3946 + (LL) 32300
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -75309.0 ( -130.52 by residue)
QMean score : 0.149
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