Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAIGQGAVFGIAIWVLFHLIIMPIMHTVPAVWDQPYQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN |
2OAR Chain:A ((34-56)) | -----------------------------------------------------------------------RGNIVDLAVAVVIGTAFTALVTK---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9835 for 85 contacts (-115.7/contact) +
2D Compatibility (PS) -2218 + (NN) 345 + (LL) 11680
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -1978.0 ( -23.27 by residue)
QMean score : 0.304
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