Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAHKIFWLNLAAIIIISIVVSGGMFLAMKWEQIHLKDGLKKVLSTYPIKNLETLYEIDGHDNPHYENNDQDTWYIESSYSVVGSDELLKEDRMLLKVDKNTHKITGEYDTTT--NDRKDATDSTYKSYPVKVVNNKIVFTKDVKDPALKQKIENNQFLIQSGDLTSILNSNDLKVTHDPTTDYYNLSGKLSNDNPNVKQLKRRYNIPSNASTKVELKGMSDLKGNNHQDQKLYFYFSSPGKNQIIYKESLTYNKLSEH |
4BIG Chain:A ((25-239)) | ------------------------------------KKSFEKTLSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVNSQMAIQNKGEALKIKGMLLKIDRNTRSAKGFYYTNEIKTEKYEVAQDNQKKYPVKMINNKFISTEEVKEENIKKEIENFKFFAQYSNF-----YKDGDIS------SYSAQYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGT----------KKIEFTFLENKNENIYFTDSL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28794 for 1323 contacts (-21.8/contact) +
2D Compatibility (PS) -20994 + (NN) -9906 + (LL) 4812
1D Compatibility (HY) -13200 + (ID) 3700
Total energy: -71782.0 ( -54.26 by residue)
QMean score : 0.481
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