Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
3ECO Chain:A ((3-139))
--FTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQ--RRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
General information:
TITO was launched using:
RESULT:
Template:
3ECO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40554 for 815 contacts (-49.8/contact) +
2D Compatibility (PS) -14331 + (NN) -5943 + (LL) 288
1D Compatibility (HY) -17600 + (ID) 6750
Total energy: -84890.0 ( -104.16 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3ECO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ECO-query.scw
PDB file :
Tito_Scwrl_3ECO.pdb
: