Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGVMLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIVTQSVMIGIMSGLMSFGIIGAYSIIFPLT---FKFGA------ENSNVIMIVASILLLFSFVVFFFIYGMVSGASALEFEKISTEGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL |
| 4KSB Chain:A ((708-768)) | ----------------------------------------------------------------------------------------------------------VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43505 for 261 contacts (-166.7/contact) +
2D Compatibility (PS) -4929 + (NN) 2152 + (LL) 14828
1D Compatibility (HY) -7200 + (ID) 900
Total energy: -39554.0 ( -151.55 by residue)
QMean score : 0.182
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