Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVVPDKNATSEDSEEA
2I9Z Chain:A ((5-90))
-KVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVI-------------
General information:
TITO was launched using:
RESULT:
Template:
2I9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54014 for 512 contacts (-105.5/contact) +
2D Compatibility (PS) -9362 + (NN) -4477 + (LL) 496
1D Compatibility (HY) -12000 + (ID) 4250
Total energy: -83607.0 ( -163.29 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_2I9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I9Z-query.scw
PDB file :
Tito_Scwrl_2I9Z.pdb
: