Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS
4HB7 Chain:A ((5-267))
-TKTKIMGILNVT----------NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARH---
General information:
TITO was launched using:
RESULT:
Template:
4HB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114017 for 2149 contacts (-53.1/contact) +
2D Compatibility (PS) -28110 + (NN) -22250 + (LL) -88
1D Compatibility (HY) -35200 + (ID) 12650
Total energy: -212315.0 ( -98.80 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_4HB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HB7-query.scw
PDB file :
Tito_Scwrl_4HB7.pdb
: