Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAHKLYNQ-KKYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII
1SST Chain:A ((80-240))
-------DIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFD-VDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGT-------HPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141400 for 1271 contacts (-111.3/contact) +
2D Compatibility (PS) -16363 + (NN) -5987 + (LL) 3476
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -175974.0 ( -138.45 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_1SST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SST-query.scw
PDB file :
Tito_Scwrl_1SST.pdb
: