Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
2J5U Chain:A ((74-117))
-----------------------------------TENQHLKERLEELAQLESEVA----DLKKENKDLKESL-DITDSIRDYD-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2J5U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16293 for 177 contacts (92.1/contact) +
2D Compatibility (PS) -5034 + (NN) -5576 + (LL) 4328
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: 7361.0 ( 41.59 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_2J5U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J5U-query.scw
PDB file :
Tito_Scwrl_2J5U.pdb
: