Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDT----LVDIIFYSALFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK |
| 3AYF Chain:A ((435-488)) | --------------------RIWQIILVVGMLLWLFIVFRG-VKRGLKRESDKGGLIHLLFYSAI-----AVPFFYIFAF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28234 for 252 contacts (-112.0/contact) +
2D Compatibility (PS) -5013 + (NN) -355 + (LL) 16496
1D Compatibility (HY) -10400 + (ID) 1100
Total energy: -28606.0 ( -113.52 by residue)
QMean score : 0.308
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