Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIEWQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
1SFL Chain:A ((3-238))
--HVEVVATITPQL---ETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLK---DSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
General information:
TITO was launched using:
RESULT:
Template:
1SFL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175290 for 1945 contacts (-90.1/contact) +
2D Compatibility (PS) -25231 + (NN) -14498 + (LL) 1060
1D Compatibility (HY) -35200 + (ID) 11200
Total energy: -260359.0 ( -133.86 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1SFL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFL-query.scw
PDB file :
Tito_Scwrl_1SFL.pdb
: