Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDNPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
3KBY Chain:A ((5-145))
---------------FNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDNPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
General information:
TITO was launched using:
RESULT:
Template:
3KBY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123009 for 1008 contacts (-122.0/contact) +
2D Compatibility (PS) -14690 + (NN) -1718 + (LL) 1084
1D Compatibility (HY) -24400 + (ID) 7050
Total energy: -169783.0 ( -168.44 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3KBY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KBY-query.scw
PDB file :
Tito_Scwrl_3KBY.pdb
: