Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
1YOD Chain:A ((23-32))
---------------------------------QARQNLQNLY-
General information:
TITO was launched using:
RESULT:
Template:
1YOD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 362 for 30 contacts (12.1/contact) +
2D Compatibility (PS) -1039 + (NN) 756 + (LL) 2212
1D Compatibility (HY) -800 + (ID) 150
Total energy: 1341.0 ( 44.70 by residue)
QMean score : 0.947
(partial model without unconserved sides chains):
PDB file :
Tito_1YOD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YOD-query.scw
PDB file :
Tito_Scwrl_1YOD.pdb
: