Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGDLSVSFKRTKDI---LKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ |
1U7U Chain:A ((192-400)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAA-------------LTIKMVKNPDIVAGVAALKDHRP--YVVGFAAETNNVEEYARQKRIRKNLDLICAN----------SDNNALHLFWQDGDKV-LPLERKELLGQLLLDEIVTRY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82292 for 1468 contacts (-56.1/contact) +
2D Compatibility (PS) -20100 + (NN) -12478 + (LL) 15476
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -119344.0 ( -81.30 by residue)
QMean score : 0.486
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