Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
4A0X Chain:A ((6-189))
LKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKR-
General information:
TITO was launched using:
RESULT:
Template:
4A0X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84218 for 1376 contacts (-61.2/contact) +
2D Compatibility (PS) -19229 + (NN) -1238 + (LL) -172
1D Compatibility (HY) -26400 + (ID) 9150
Total energy: -140407.0 ( -102.04 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_4A0X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A0X-query.scw
PDB file :
Tito_Scwrl_4A0X.pdb
: