Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK
1G2R Chain:A ((7-85))
---RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQVFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSF--SMEVEESFYDELI----------
General information:
TITO was launched using:
RESULT:
Template:
1G2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31273 for 524 contacts (-59.7/contact) +
2D Compatibility (PS) -8303 + (NN) -4116 + (LL) 1552
1D Compatibility (HY) -4800 + (ID) 1800
Total energy: -48740.0 ( -93.02 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_1G2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2R-query.scw
PDB file :
Tito_Scwrl_1G2R.pdb
: