Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHSD
2PIH Chain:A ((3-109))
LYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIPVIQEFRDSQMEVNDLLQLVAHTI--------------
General information:
TITO was launched using:
RESULT:
Template:
2PIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 41564 for 600 contacts (69.3/contact) +
2D Compatibility (PS) -11648 + (NN) -3150 + (LL) 816
1D Compatibility (HY) 5600 + (ID) 550
Total energy: 32632.0 ( 54.39 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_2PIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PIH-query.scw
PDB file :
Tito_Scwrl_2PIH.pdb
: