Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
4QB4 Chain:A ((4-136)) | ---------------------------------------------KEPATLIKAIDGDTLKVMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMLENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8116 for 1007 contacts (8.1/contact) +
2D Compatibility (PS) -13977 + (NN) -5748 + (LL) 3588
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -19821.0 ( -19.68 by residue)
QMean score : 0.481
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