Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSDQ
2X4K Chain:A ((3-62))
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSD-
General information:
TITO was launched using:
RESULT:
Template:
2X4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15003 for 327 contacts (-45.9/contact) +
2D Compatibility (PS) -6699 + (NN) -3301 + (LL) 120
1D Compatibility (HY) -7600 + (ID) 3000
Total energy: -35483.0 ( -108.51 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2X4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X4K-query.scw
PDB file :
Tito_Scwrl_2X4K.pdb
: