Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLINTMYPH-QPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTDLLNQMNIQ-TTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLINPYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVAEKVDTIAEGIELATTLIDNGEALKKYHQMRGE |
| 1KGZ Chain:A ((52-337)) | --------------------------------------LISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIV-GTGGDGTNSINISTASAFVAASCGAKVAKHGNRS----AGSCDLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHG-GGMDEVAIHTPTQVAELN-NGEIESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQ-DNLRHNAQLALETIRSGTAFER------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140992 for 2436 contacts (-57.9/contact) +
2D Compatibility (PS) -29351 + (NN) -9038 + (LL) 4648
1D Compatibility (HY) -11600 + (ID) 5100
Total energy: -191433.0 ( -78.58 by residue)
QMean score : 0.497
|
|
|