Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
3H4Q Chain:A ((21-187))
-IRLGKMSDLDQILNLVEEAKELMK----------YPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKV--------------PFYAYYKNLK-
General information:
TITO was launched using:
RESULT:
Template:
3H4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110894 for 1058 contacts (-104.8/contact) +
2D Compatibility (PS) -15640 + (NN) -9611 + (LL) 1016
1D Compatibility (HY) -23200 + (ID) 7050
Total energy: -165379.0 ( -156.31 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_3H4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H4Q-query.scw
PDB file :
Tito_Scwrl_3H4Q.pdb
: