Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
3Q83 Chain:A ((1-149))
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
General information:
TITO was launched using:
RESULT:
Template:
3Q83.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76351 for 1123 contacts (-68.0/contact) +
2D Compatibility (PS) -16023 + (NN) -5389 + (LL) 0
1D Compatibility (HY) -20400 + (ID) 7450
Total energy: -125613.0 ( -111.85 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3Q83.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q83-query.scw
PDB file :
Tito_Scwrl_3Q83.pdb
: