Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSRDIKELQLIKVPIPSGQYVYSLPNDRKFHPLEKLGRYLMDSFVNIDGTDNLLVLKTLPGNAQSIGAILDQINWEEVLGTICGDDTCLIICRSKEASDEIKSRIFNLL
1B4A Chain:A ((4-149))
----GQRHIKIREIIMSNDIETQDELVDRLREAGFNVTQATVSRDIKEMQLVKVPMANGRYKYSLPSDQRFNPLQKLKRALVDVFIKLDGTGNLLVLRTLPGNAHAIGVLLDNLDWDEIVGTICGDDTCLIICRTPKDAKKVSNQLLSML
General information:
TITO was launched using:
RESULT:
Template:
1B4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88011 for 1007 contacts (-87.4/contact) +
2D Compatibility (PS) -16142 + (NN) -5826 + (LL) 196
1D Compatibility (HY) -19200 + (ID) 4400
Total energy: -133383.0 ( -132.46 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_1B4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B4A-query.scw
PDB file :
Tito_Scwrl_1B4A.pdb
: