Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMT-RDDAQIIFIDTPGIHKPKHK--LGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIE-MLKNVKTPVFLVLNKIDLVHPDE-LMPKIEE-YQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVK--ESEDRVHIEATIYVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGYVEDQD |
| 3R9W Chain:A ((8-305)) | ----KVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199414 for 2342 contacts (-85.1/contact) +
2D Compatibility (PS) -31363 + (NN) -8142 + (LL) 672
1D Compatibility (HY) -32800 + (ID) 6700
Total energy: -277747.0 ( -118.59 by residue)
QMean score : 0.544
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