Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIKRGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIKRLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSNIKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTILKLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE |
| 3JAD Chain:A ((31-94)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDS-LDLDPSMLDSIWKPDLF------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10792 for 234 contacts (46.1/contact) +
2D Compatibility (PS) -6220 + (NN) -1701 + (LL) 12732
1D Compatibility (HY) -4800 + (ID) 950
Total energy: 9853.0 ( 42.11 by residue)
QMean score : 0.242
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