Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
4OF1 Chain:A ((1-115))
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAV-----
General information:
TITO was launched using:
RESULT:
Template:
4OF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60154 for 836 contacts (-72.0/contact) +
2D Compatibility (PS) -12426 + (NN) -3453 + (LL) 292
1D Compatibility (HY) -16400 + (ID) 5750
Total energy: -97891.0 ( -117.09 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_4OF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OF1-query.scw
PDB file :
Tito_Scwrl_4OF1.pdb
: