Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDS--NPTQTAEQRRELINGVFTDI------NPYIKNMMYVLADNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDGSVRNDLVQLQRKFRRVN
2BO5 Chain:A ((14-120))
---IEGRYATALYSAASKQNKLEQVEKELLRVGQILKEP----KMAASLLNPY----VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTV---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2BO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52839 for 659 contacts (-80.2/contact) +
2D Compatibility (PS) -10368 + (NN) -3913 + (LL) 6704
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -66966.0 ( -101.62 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_2BO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BO5-query.scw
PDB file :
Tito_Scwrl_2BO5.pdb
: