Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAKLYNDLYINKKTIDDVSAVSEVKYDIKS-QMSDDEIKRLE---EQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEI---EGVSLFELQANQLKTLN----HQSGH--TIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQPK-PGESVGRLVNVDCKDTVLEYSELDPEVAN----------QFNNANIGIHAFKLGFI--LNAVNRELPYHLAIKNLKQLDENFGVIEQPT---LKFELFYFDIF--TYGTSFVTLQVPREEEFSPLKNKE--GKDSVATATEDLRRMGLI |
| 4BMA Chain:A ((44-458)) | -----------QGHVFAFVDELQTGERSQLFHQLSSFDPVRINEL-ADKALNPP-----PASLEPLPDIATASILDSDPKDLEQWYEEGLKLVAGNKVAVVLMAGGQGTRLGSSAPKGCFDIGLPSHKSLFQIQAERIAKLQLLAQRISGKEAVIPWYVMTSGPTRKPTEEFFEQHKYFGLNKSDVIIFEQGVLPCISNEGKILMESKFKVAVAPDGNGGIYQALLTSGVREDMRKRGIEHIHTYCVDNCLVKVADPVFIGFAASKQVDIATKVVRKRNATESVGLILQKNGKPDVVEYSEIDKETAEAKDPKQPDVLKFRAANIVNHYYSFKFFESIELWAHKLPHHVARKKIPCIK----------PNGIKLEQFVFDVFPMTPLEKFACIEVRREDEFSPLKNARGTGEDDPDTSKRDIMSQG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128927 for 2911 contacts (-44.3/contact) +
2D Compatibility (PS) -40073 + (NN) -19191 + (LL) 2236
1D Compatibility (HY) -26000 + (ID) 6900
Total energy: -218855.0 ( -75.18 by residue)
QMean score : 0.476
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