Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKELTMDGKHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTATYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK
4NZL Chain:B ((17-114))
-------------------------------------------KHTVPYTISVDGITALHRTYFVF--NKKVLYQEIDSKVKNELASQRGVTTEKINNAQTATYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK
General information:
TITO was launched using:
RESULT:
Template:
4NZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35861 for 642 contacts (-55.9/contact) +
2D Compatibility (PS) -10711 + (NN) -3029 + (LL) 2456
1D Compatibility (HY) -12000 + (ID) 4800
Total energy: -63945.0 ( -99.60 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4NZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NZL-query.scw
PDB file :
Tito_Scwrl_4NZL.pdb
: