Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
3FB4 Chain:A ((1-215))
MNIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQGNLVPDEVTIGIVHERLSKDDCQKGFLLDGFPRTVAQADALDSLLTDLGKKLDYVLNIKVEQEELMKRLTGRWICKTCGATYHTIFNPPAVEGICDKDGGELYQRIDDKPETVKNRLDVNMKQTQPLLDFYSQKGVLKDIDGQQDIKKVFVDINDLLGGL
General information:
TITO was launched using:
RESULT:
Template:
3FB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76231 for 1664 contacts (-45.8/contact) +
2D Compatibility (PS) -23326 + (NN) -13265 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7250
Total energy: -146472.0 ( -88.02 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3FB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FB4-query.scw
PDB file :
Tito_Scwrl_3FB4.pdb
: