Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
2IL5 Chain:A ((8-171))
----NVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMP--SETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
General information:
TITO was launched using:
RESULT:
Template:
2IL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48846 for 1127 contacts (-43.3/contact) +
2D Compatibility (PS) -17323 + (NN) -2200 + (LL) 552
1D Compatibility (HY) -24000 + (ID) 8100
Total energy: -99917.0 ( -88.66 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2IL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IL5-query.scw
PDB file :
Tito_Scwrl_2IL5.pdb
: