Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTE----HEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLK-SARNKAQYFQKMMRDYLDTDDVTSLSTDDILMLMAKLKQSRGPS-------KGLDLIYAPIKTD-YIQNDYPTTKPIFACYTKDEGDIYITSEQKKLSPQRFIDIMELN-DIPL--KYEDV--QTAKQQSLAITHCYFKQPMKQFLQHLNIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILA-AHQYPTTAHLKFLSRQMQNDLANFAKSG-----KMPWPMYHNERRYYRTYQ |
| 1C7J Chain:A ((6-460)) | --VTTQYGKVKGTTENGVHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGPVCPQPSDLL-------SLSYTELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFFTSDSDVRSQETLDAALEYSLGKPLAEKAADLYPRSLESQIHMVTDLLFWRPAVAF---ASAQSHYAPVWMYRFDWH-PEKPPYNKAFHALELPFVFGNLDGLERMAKAEITDEVKQLSHTIQSAWITFAKTGNPSTEAVNWPAYHEETR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202236 for 3711 contacts (-54.5/contact) +
2D Compatibility (PS) -46369 + (NN) -26242 + (LL) 1440
1D Compatibility (HY) -24400 + (ID) 7350
Total energy: -305157.0 ( -82.23 by residue)
QMean score : 0.445
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