Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQYDDSKVAVSQMKDAIEDQGYDVV
1P8G Chain:A ((1-67))
MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV-
General information:
TITO was launched using:
RESULT:
Template:
1P8G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26906 for 487 contacts (-55.2/contact) +
2D Compatibility (PS) -7053 + (NN) -1182 + (LL) 192
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -44849.0 ( -92.09 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1P8G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P8G-query.scw
PDB file :
Tito_Scwrl_1P8G.pdb
: