Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
4UMK Chain:A ((55-222)) | --------------------------------------------------DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLDGEKQELILNSIIGQKLSVRQTEDLAR------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31787 for 1096 contacts (-29.0/contact) +
2D Compatibility (PS) -18345 + (NN) -7239 + (LL) 7700
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -66821.0 ( -60.97 by residue)
QMean score : 0.565
|
|
|