Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKKNKNFLLDLMFNNKNGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF
1OME Chain:A ((2-258))
------------------------KELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNP----------------DTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF
General information:
TITO was launched using:
RESULT:
Template:
1OME.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49315 for 2041 contacts (-24.2/contact) +
2D Compatibility (PS) -26520 + (NN) -16432 + (LL) 3500
1D Compatibility (HY) -29600 + (ID) 11750
Total energy: -130117.0 ( -63.75 by residue)
QMean score : 0.834
(partial model without unconserved sides chains):
PDB file :
Tito_1OME.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OME-query.scw
PDB file :
Tito_Scwrl_1OME.pdb
: