Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATRTQARGAVVELLYAFESGNEEIKKIASSMLEEKKIKN-NQLAFALSLFNGVLEKINEIDALIEPHLKDWDFKRLGSMEKAILRLGAYEIGFTPTQNP-IIINECIELGKLYAEPNTPKFLNAILDSLSKKLAQKPLI
2JR0 Chain:A ((1-132))
MRYRKGARDTAFLVLYRWDLRGENPGELFKEVVEEKNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEKHLKGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAYITSSKE
General information:
TITO was launched using:
RESULT:
Template:
2JR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80099 for 1036 contacts (-77.3/contact) +
2D Compatibility (PS) -13554 + (NN) -7742 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -116045.0 ( -112.01 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_2JR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JR0-query.scw
PDB file :
Tito_Scwrl_2JR0.pdb
: