Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALETIATLREYRKSLKE---SVGFVPTMGALHRGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKKLGLEILKNL------EVDYLECCNHK-LEPLKTIEPANTLVLVAARVGKTRLLDNLWV |
2EJC Chain:A ((1-276)) | MRIIETIEEMKKFSEEMREKKKTIGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFHPSVEEMYPPDFSTYVE---ETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIECPIVREPDGLAMSSRNVYLSPEERQQALSLYQSLKIAENLYLNGERDAEKIKE---EMIKHLSRFDKVKIDYVEIVDEETLEPVEKID-RKVIVAVAAWVGNARLIDNTIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140715 for 2140 contacts (-65.8/contact) +
2D Compatibility (PS) -28801 + (NN) -13053 + (LL) 452
1D Compatibility (HY) -28400 + (ID) 6200
Total energy: -216717.0 ( -101.27 by residue)
QMean score : 0.484
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