Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAV--SHKISEGCKC---VKEGDVIAFGKYKGAEIVLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH
1WNR Chain:A ((2-93))
--IKPLGDRVVVKRI-------------------PQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44439 for 421 contacts (-105.6/contact) +
2D Compatibility (PS) -7348 + (NN) 863 + (LL) 1616
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -58458.0 ( -138.86 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1WNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WNR-query.scw
PDB file :
Tito_Scwrl_1WNR.pdb
: