Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGA-KLLVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQASGEKPQFLDELLLRPMSAKLLEPTFMEKKGWVDREKLLDVSGRGRARQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYREMVFEDGVIVKNGRYFVLPHNARLVVARNEEENHKLDIEHPLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA
1VL2 Chain:A ((2-81))-KEKVVLA-YSGGLDTSVILKWLCEKGFDVIAYVANV---GQKDDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAMYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALNPNLKVISPWKDPEFLAKFKTDLINYAMEKGIPIKVSKKRPYSEDENLMHISHEAGKLEDPAHIPDEDVFTWTVSPKDAPDEETLLEIHFENGIPVKVVNLKDGTEKTDPLELFEYLNEVGAKNGVGRLDMVENRFIGIKSRGVYETPGATILWIAHRDLEGITMDKEVMHLRDMLAPKFAELIYNGFWFSPEMEFLLAAFRKAQENVTGKVTV


General information:
TITO was launched using:
RESULT:

Template: 1VL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32396 for 488 contacts (-66.4/contact) +
2D Compatibility (PS) -8867 + (NN) -3663 + (LL) 172
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -52954.0 ( -108.51 by residue)
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_1VL2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VL2-query.scw
PDB file : Tito_Scwrl_1VL2.pdb: