Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKSKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISKS-NPKDIQRVVKQFLELA |
3DGE Chain:C ((2-120)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKKVLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKLSEFTPD-----LIVLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLLNE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64062 for 917 contacts (-69.9/contact) +
2D Compatibility (PS) -12837 + (NN) -8087 + (LL) 14604
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -80832.0 ( -88.15 by residue)
QMean score : 0.563
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