Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVKKYLWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN |
| 1HN0 Chain:A ((778-809)) | -----------------------------------------------------------------------------------NKNVETTLFQHAITPTLNTLWINGQKIENMPYQTTLQQGDWLIDSNGNGYLITQAEKVNVSRQHQVSAENKNRQPTEGNFSSAWIDHSTRPKDASYEYMVFLDATPEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HN0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1379 for 103 contacts (-13.4/contact) +
2D Compatibility (PS) -3578 + (NN) -713 + (LL) 7196
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -2274.0 ( -22.08 by residue)
QMean score : -0.018
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