Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDNLSLSETLDAYGRELSRLKNQQETIKASTIESSNLNSIVNKIKSGL----PF-------GTISAFRPFKEAFI-----------------------KDFTQDERELLVEAYKSGYKASQLDKVSKKWRDDPNPIDASYLADAFLREYRTIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLLDQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEAICYCQNAETGKVDLVLATEKDFGKVDMTFTGITFTIPLTQSITRLHNKVYTFFDKQGKDNYGVFFDELSTTKLKAMSIPKIADEFYRHLENRVKSFIRARQYHGSPRTFDADDIEKYELQAIKRLDLQRCAKSKSFKASYNHNIKINNLANALRQGKEVSKTLITKVLANTIDTDAGYCFISDLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSLHNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFRGNDYQFKG |
| 1LRZ Chain:A ((243-411)) | --INFD--EYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQ--QQLDA---------NEQKIEEGKRLQEEHGNEL--PISAGFFFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIEYVGDFIKPINKPVYAAYTAL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22398 for 697 contacts (32.1/contact) +
2D Compatibility (PS) -13665 + (NN) 632 + (LL) 29880
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: 30745.0 ( 44.11 by residue)
QMean score : 0.208
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