Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFEMLYSKIHRATITDANLNYIGSITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKKRGKICVNGAAARKVAIGDVVIILAYASMNEDEINTHKPSIVLVDEKNEILEKG |
1UHD Chain:A ((4-93)) | -------------------------ITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKKRGEICVNGAAARKVAIGDVVIILAYASMNEDEINAHKPSIVLVDEKNEILEKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2005 for 532 contacts (3.8/contact) +
2D Compatibility (PS) -9525 + (NN) 3216 + (LL) 1988
1D Compatibility (HY) 2400 + (ID) 350
Total energy: -266.0 ( -0.50 by residue)
QMean score : 0.176
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