Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFSQLGGLSGLLDGVKKEFSQLEEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKAVEENRKNLAFNMLGNFAKL
3F42 Chain:A ((4-94))
-DFSQLGGL---LDGMKKEFSQLEEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKAVEENRKNLAFNMLG-----
General information:
TITO was launched using:
RESULT:
Template:
3F42.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10711 for 539 contacts (-19.9/contact) +
2D Compatibility (PS) -10069 + (NN) -7046 + (LL) 620
1D Compatibility (HY) -12400 + (ID) 4500
Total energy: -44106.0 ( -81.83 by residue)
QMean score : 0.678
(partial model without unconserved sides chains):
PDB file :
Tito_3F42.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F42-query.scw
PDB file :
Tito_Scwrl_3F42.pdb
: