Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDALIRPMASIGANQATEARLLVGQKGYDRYAQISQKTQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLNQQEPYYGDIGVRLEERHKRLVVAQFDPFFPKNPFLKNDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALSTPKIELLVWRQGFEFYIKVR |
4YO1 Chain:A ((301-345)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVIVQINDTKITQATQVKTTISLLRAGSTAKIKILRDN--KPLTLDVEVTD----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19711 for 234 contacts (-84.2/contact) +
2D Compatibility (PS) -4694 + (NN) 800 + (LL) 20048
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -6907.0 ( -29.52 by residue)
QMean score : 0.592
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