Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSAVALAFMLFAYRSLKEQNFFSASALLEALWFVGFF--ALFNYALKNPSRFYELFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLSHNEMSVWLFLSILQALFLSVLFAIIILVYLEAHVWCSLGALFLAFGFFKTWRSVVVICLKKCFALGFYKPFLLLVGFLNVSVTKALMDASMQEKQDLSLLLVVALFLCCVFIIGVPFFINALFRVQNSLKETYKLATNLSANLTQSAFQSLQHATTSPAPSHISSSASQSVSKEKETHSPTFKVETTQLDVKIPNFKQKKVKKDTIDTKNEI |
| 3USU Chain:A ((65-139)) | -----------------TGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKA----------GAGFLGLFDSAVFNSSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSFASKLSFLDLASFLVAN-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3USU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36280 for 358 contacts (-101.3/contact) +
2D Compatibility (PS) -7031 + (NN) 6665 + (LL) 15832
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -26664.0 ( -74.48 by residue)
QMean score : -0.056
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