Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRLKIAYRLLGLMSFIALVLAIVLISILPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQ--SHLEREVHIVNIAIYQQDNNPIASVSIA--AKLLNENKLVYEKRYKIVLSYLFDTPDF-DYASMPKNPTGFKITRYSITEIAPTNRND |
2BHM Chain:A ((97-231)) | --------------------------------------------------------------------------------------------------------SYDTVMDKYWLSQYVIARETYDWYTLQKDYETVGMLSSPSEGQSYASQFQGDKALDKQYGSNVRTSVTIVSIV---PNGKGIGTVRFAKTTKR----GDGETTHWIATIGYQYVNPSLMSESARLTNPLGFNVTSYRVDPEM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39776 for 825 contacts (-48.2/contact) +
2D Compatibility (PS) -13498 + (NN) -4077 + (LL) 10600
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -54601.0 ( -66.18 by residue)
QMean score : 0.416
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