Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLL----EWIARYASLINPNGCMVIFCSYRFISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFN--------------KPKNEK----------------------YLRPLILKSPVVSGIERVKHPTQKSLTLMEKIISTHTNPNDTVLDPFMGSGTTGLACKNLKRNFIGIESEKEYFQIAQKRLS
1G60 Chain:A ((6-250))
--KIHQMNCFDFLDQV--ENKSVQLAVIDPPYNLS--------------KADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNCAFICQYLVSKGMIFQNWITWDKRDGMG-SAKRRFSTGQETILFFSKSKNH-TFNYDEVRVPYESTDRIKHASEKGILKNGKRWFPNPNGRLCGEVWHFS------------------TPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLN
General information:
TITO was launched using:
RESULT:
Template:
1G60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111035 for 1387 contacts (-80.1/contact) +
2D Compatibility (PS) -20061 + (NN) -9690 + (LL) 2788
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -154998.0 ( -111.75 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1G60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G60-query.scw
PDB file :
Tito_Scwrl_1G60.pdb
: